蛋白質組科學是一種開放獲取的期刊，出版系統研究領域的研究。蛋白質組科學根據功能和結構蛋白質組學、基因組學、代謝組學、系統分析和代謝組分析的各個方面來考慮手稿。它鼓勵提交在細胞、組織和/或環境背景下使用大規模或系統分析生物分子的研究報告。描述新的生物學或臨床見解的研究，以及描述大規模研究細胞和組織中任何和所有生物分子的新方法的方法集中研究，如質譜、蛋白質和核酸微陣列、基因組學、下一代測序和計算算法和方法，都是在蛋白質組科學的范圍內，如電子地形圖、結構方法、蛋白質組學、化學蛋白質組學、干細胞蛋白質組學、細胞器蛋白質組學、植物和微生物蛋白質組學。盡管它的名字，蛋白質組科學考慮了大規模和系統研究的所有方面，因為最終導致基因組和代謝組學變化的任何機制都會影響或受到蛋白質組的影響。為了反映生物系統的內在關系，蛋白質組科學將考慮所有這些文章。

Proteome Science is an open access journal publishing research in the area of systems studies. Proteome Science considers manuscripts based on all aspects of functional and structural proteomics, genomics, metabolomics, systems analysis and metabiome analysis. It encourages the submissions of studies that use large-scale or systems analysis of biomolecules in a cellular, organismal and/or environmental context.Studies that describe novel biological or clinical insights as well as methods-focused studies that describe novel methods for the large-scale study of any and all biomolecules in cells and tissues, such as mass spectrometry, protein and nucleic acid microarrays, genomics, next-generation sequencing and computational algorithms and methods are all within the scope of Proteome Science, as are electron topography, structural methods, proteogenomics, chemical proteomics, stem cell proteomics, organelle proteomics, plant and microbial proteomics.In spite of its name, Proteome Science considers all aspects of large-scale and systems studies because ultimately any mechanism that results in genomic and metabolomic changes will affect or be affected by the proteome. To reflect this intrinsic relationship of biological systems, Proteome Science will consider all such articles.